姓名 刘炳舰
职称 副教授
学术职衔 硕士生导师
研究方向 遗传演化、生物信息学、基因组育种
校内外学术兼职:
全国大学生生命科学竞赛评审专家;教育部研究生学位论文通讯评议专家;国家自然科学基金项目通讯评议专家;《Genes》客座编辑;《Aquaculture》、《BMC Genomics》、《Conservation Genetics》、《Frontiers in ecology and evolution》、《Frontiers in Marine Science》、《Genomics》、《International Journal of Biological Macromolecules》、《Zoologica Scripta》、《水生生物学报》、《中国海洋大学学报》等期刊审稿人。
Email liubingjian@zjou.edu.cn
学习工作简历:
2005.09-2009.07 山东大学 学士
2009.09-2012.07 中国科学院海洋研究所 硕士
2012.08-2014.08 中国科学院海洋研究所 科研助理
2014.09-2017.07 中国科学院海洋研究所 博士
2017.08-2020.12 浙江海洋大学 讲师
2020.12-至今 浙江海洋大学 副教授
2022.02-2023.02 德国亥姆霍兹海洋研究所 高级访问学者
教学情况
承担本科生课程《大学生物》、《动物生理学》、《鱼类学》、《普通生物学》、《海洋保护生物学》等
研究生课程《高级海洋生态学》、《海洋保护生物学》等
指导本科生毕业设计和学科竞赛。
海洋科学与技术学院“星颉奖”2021年、2023年最佳导师奖;指导研究生多人次获得特等奖学金、校级优秀毕业生、校级优秀毕业论文、省级优秀毕业生等。
科研项目
1. 国家自然科学基金青年基金,中国沿海斑鰶谱系地理结构及本地适应性进化的群体基因组学研究,2019/01-2021/12,负责人
2. 西藏自治区重点研发及转化项目,弧唇裂腹鱼人工繁育与陆基养殖设施技术研发,2023/03-2025/12,子课题负责人
3. 浙江省自然科学基金,黄鲫群体遗传分化及适应性进化研究,2022/01-2024/12,负责人
4. 青岛海洋科学与技术国家实验室开放课题,基于种群基因组学的日本鳗鲡遗传多样性资源评估,2018/01-2019/12,负责人
5. 舟山市科技局科技专项,中国东海鳓鱼的群体基因组学研究,2020/01-2022/12,负责人
6. 中国科学院南海海洋研究所开放课题,中国南海和东海黄鲫本地适应性研究,2020/01-2021/12,负责人
7. 浙江海洋大学人才基金,基于种群基因组学的两种舌鳎群体遗传分化与适应性进化研究,2018/09-2020/09,负责人
8. 国家自然科学基金青年基金,中国渤、黄、东海日本鳀种群遗传结构及本地适应性进化的群体基因组学研究,2018/01-2020/12,参与人
9. 国家自然科学基金面上项目,基于简化基因组测序的日本鳗鲡种群遗传结构及本地适应性进化研究,2017/01-2020/12,参与人
10. 国家自然科学基金青年基金项目,基于简化基因组测序技术(RAD-seq)解析我国松江鲈种群遗传特征与保护单元,2016/01-2018/12,参与人
11. 中国科学院知识创新领域前沿项目,基于微卫星DNA技术探讨小黄鱼种群遗传多样性及其遗传结构,2013/01-2016/12,参与人
12. 国家海洋局海洋公益性重点项目“典型海湾生境与重要经济生物资源修复技术集成及示范”。已结题,参与人
13. 国家自然科学基金“典型海湾滤食性贝类对生物硅和重金属的生物沉积作用及其时空变化特征”。已结题,参与人
代表性论文著作
1. Ying Peng, Yifan Liu, Jiasheng Li, Kun Zhang, Xun Jin, Sixu Zheng, Yunpeng Wang, Zhenming Lü, Liqin Liu, Li Gong, Bingjian Liu*. New perspective on the genetic structure of the dotted gizzard shad (Konosirus punctatus) based on RAD-seq. Marine Life Science & Technology. 2024.01
2. Bingjian Liu, Jiasheng Li, Ying Peng, Kun Zhang, Qi Liu, Xun Jin, Sixu Zheng, Yunpeng Wang, Li Gong, Liqin Liu, Zhenming Lü, Yifan Liu*. Chromosome-level reference genome and population genomic analyses provide insights into the evolution and adaptation of common hairfin anchovy (Setipinna tenuifilis). Molecular Ecology. 2023
3. Zhenming Lü, Yantao Liu, Shijie Zhao, Jiaqi Fang, Kehua Zhu, Jing Liu, Li Gong, Liqin Liu, Bingjian Liu*. Amblyopinae Mitogenomes Provide Novel Insights into the Paraphyletic Origin of Their Adaptation to Mudflat Habitats. International Journal of Molecular Science. 2023, 24, 4362
4. Bingjian Liu, Xun Jin, Kun Zhang, Yifan Liu*, Shaowen Wang, Shiyi Chen, Shufei Zhang, Xiaolong Yin. Transcriptomic analysis of of liver tissue of black sea bass (Centropristis striata) exposed to high ammonia nitrogen environment. Genes. 2023.07.1
5. Sixu Zheng, Chi Zhang, Shufei Zhang, Yifan Liu, Xun Jin, Yunpeng Wang, Jiasheng Li, Ying Peng, Kun Zhang, Bingjian Liu*. Daphnia sp. (Branchiopoda: Cladocera) Mitochondrial Genome Gene Rearrangement and Phylogenetic Position Within Branchiopoda. Biochemical Genetics, 2023
6. BingJian Liu, Kun Zhang, ShuFei Zhang, YiFan Liu, JiaSheng Li, Ying Peng, Xun Jin, YunPeng Wang, SiXu Zheng, Li Gong, LiQin Liu, ZhenMing Lü*. Chromosome-level genome assembly of the dotted gizzard shad (Konosirus punctatus) provides insights into its adaptive evolution. Zoological Research, 2022, 43(2): 217−220
7. Jiasheng Li, Bingjian Liu*, Shiyi Chen, Ying Peng, Kun Zhang, Wenhua Huang, Xudong Liang, Haodi Shen, Liqin Liu, Zhenming Lü, Li Gong*. Development and characterization of seventeen novel microsatellite markers in common hairfin anchovy (Setipinna tenuifilis) using third-generation sequencing technology. Journal of Applied Ichthyology. 2022.38, 4: 462-467
8. Bingjian Liu, Jiasheng Li, Kun Zhang, Ying Peng, Yifan Liu, Xun Jin, Sixu Zheng, Yunpeng Wang, Liqin Liu, Zhenming Lü, Shufei Zhang, Li Gong*. Population genetic structure and genetic diversity in wild populations of Konosirus punctatus reveled by microsatellite markers. Frontiers in Marine Science.2022
9. Xun Jin, Xingle Guo, Jian Chen, Jiasheng Li, Shufei Zhang, Sixu Zheng, Yunpeng Wang, Ying Peng, Kun Zhang, Yifan Liu, Bingjian Liu*. The complete mitochondrial genome of Hemigrapsus sinensis (Brachyura, Grapsoidea, Varunidae) and its phylogenetic position within Grapsoidea. Genes & Genomics. 2022.11.08
10. Bingjian Liu, Ying Peng, Kun Zhang, Yifan Liu, Jiasheng Li, Jian Chen, Xuepeng Li, Xun Jin, Sixu Zheng, Yunpeng Wang, Shufei Zhang, Li Gong, Zhenming Lü, Liqin Liu*. Comparative analysis of the complete mitochondrial genomes of two species of Clupeiformes and the phylogenetic implications for Clupeiformes. Journal of the Marine Biological Association of the United Kingdom. 2022,102, 445–456.
11. Chi Zhang, Kun Zhang, Ying Peng, Jianshe Zhou, Yifan Liu, Bingjian Liu*. Novel gene rearrangement in the mitochondrial genome of three Garra and insights into the phylogenetic relationships of Labeoninae. Frontiers in Genetics.2022.06
12. Jiasheng Li, Ying Peng, ShuFei Zhang, Yifan Liu, Kun Zhang, Jian Chen, Hua Zhang, Chi Zhang*, Bingjian Liu*. The complete mitochondrial genome of Parachiloglanis hodgarti and its phylogenetic position within Sisoridae. Journal of Oceanology and Limnology. 2022
13. Bingjian Liu, Ying Peng, Yifan Liu, Jiasheng Li, Kun Zhang, Jian Chen, Li Gong, Liqin Liu, Zhenming Lü, Chi Zhang*. Complete Mitochondrial Genome Analysis of Daphniopsis tibetana (Branchiopoda: Diplostraca): New Insights into the Taxonomy of the Genus and Its Phylogenetic Implications for Branchiopoda. Journal of Ocean University of China. 2022.11
14. Ying Peng, Jiasheng Li, Kun Zhang, Yifan Liu*, Xuepeng Li, Jian Chen, Hua Zhang, Li Gong, Liqin Liu, Zhenming Lü, Bingjian Liu*. Identification of a large dataset of SNPs in hair-fin anchovy (Setipinna tenuifilis) based on RAD-seq. Animal Genetics, 2021, 52: 371–374
15. Kun Zhang, Kehua Zhu, Yifan Liu*, Hua Zhang, Li Gong, Lihua Jiang, Liqin Liu, Zhenming Lü, Bingjian Liu*. Novel gene rearrangement in the mitochondrial genome of Muraenesox cinereus and the phylogenetic relationship of Anguilliformes. Scientific Reports, 2021
16. Kun Zhang, Yifan Liu*, Jian Chen, Hua Zhang, Li Gong, Lihua Jiang, Liqin Liu, Zhenming Lü, Bingjian Liu*. Characterization of the complete mitochondrial genome of Macrotocinclus affinis (Siluriformes; Loricariidae) and phylogenetic studies of Siluriformes. Molecular Biology Reports.2021.01. 48, 677–689
17. Bingjian Liu*, Kun Zhang, Kehua Zhu, Muhammad Shafi, Li Gong, Lihua Jiang, Liqin Liu, Faiz Muhammad*, Zhenming Lü*. Population genetics of Konosirus punctatus in Chinese coastal waters inferred from two mtDNA genes (COI and Cytb). Frontiers in marine science, 2020, 6(7)
18. Bingjian Liu*, Yulong Li, Baidong Zhang, Jinxian Liu*. Genome-wide discovery of single-nucleotide polymorphisms and their application in population genetic studies in the endangered Japanese eel (Anguilla japonica). Frontiers in marine science, 2020, 1(6)
19. Li Gong*, Xinting Lu, Zhifu Wang, Kehua Zhu, Liqin Liu, Lihua Jiang, Zhenming Lü, Bingjian Liu*. Novel gene rearrangement in the mitochondrial genome of Coenobita brevimanus (Anomura: Coenobitidae) and phylogenetic implications for Anomura. Genomics, 2020, 03.V112(2)
20. Bingjian Liu, Kehua Zhu, Yifan Liu, Lihua Jiang, Zhenming Lv, Liqin Liu, Weinan Zhang, Zhu Liu,Wen Duan, Li Gong*. Complete mitochondrial genome of the vulnerable malabar pufferfish Carinotetraodon travancoricus (Tetraodontiformes, Tetraodontidae). Mitochondrial DNA Part B.2018
21. Bingjian Liu, Baidong Zhang, Tianxiang Gao, Jinxian Liu. Signatures of temporal genetic differentiation of the small yellow croaker (Larimichthys polyactis) revealed by microsatellite markers. Fisheries Research. 2017,10(194)
22. Bingjian Liu, Baidong Zhang, Dongxiu Xue, Tianxiang Gao, Jinxian Liu. Population structure and adaptive divergence in a high gene flow marine fish: the small yellow croaker (Larimichthys polyactis). PloS one, 2016, 11(4): e0154020.
23. Bingjian Liu, Tianxiang Gao, Jinxian Liu. Development of 17 novel polymorphic microsatellites in the small yellow croaker Larimichthys polyactis. Conservation Genetics Resources. 2014,6(2)
24. Qinzeng Xu*, Bingjian Liu*, Yi Zhou. Does the eelgrass meadow influence the macrobenthic community structure in Swan Lake, northern China. Marine Biodiversity,2016
25. Yi Zhou*, Peng Liu*, Bingjian Liu*, Xujia Liu, Xiaomei Zhang, Feng Wang, Hongsheng Yang. Restoring eelgrass (Zostera marina L.) Habitats using a simple and effective transplanting technique. PloS one, 2014, 9(4)
26. Bingjian Liu, Yifan Liu, Kehua Zhu, Liqin Liu, Lihua Jiang, Li Gong, Zhu Liu, Weinan Zhang,Wen Duan, Zhenming Lv. Characterization of complete mitochondrial genome of Jaydia lineata (Perciformes, Apogonidae). Mitochondrial DNA Part B.2018
27. Li Gong*, Guangyi Fan*, Yandong Ren*, Yongjiu Chen*, Qiang Qiu*, Liqin Liu, Yanli Qin, Bingjian Liu, Lihua Jiang, Haorong Li, Yan Zeng, Qionghua Gao, Chen Zhang, Zhongkai Wang, Hui Jiang, Jinfu Tian, He Zhang, Xin Liu, Xun Xu, Wen Wang#, Zhenming Lü#, Yongxin Li#. Chromosomal level reference genome of Tachypleus tridentatus provides insights into evolution and adaptation of horseshoe crabs. Molecular Ecology Resources,2019,19: 744-756.
28. Zhenming Lu, Kehua Zhu, Hui Jiang, Xinting Lu, Bingjian Liu, Yingying Ye, Lihua Jiang, Liqin Liu, Li Gong*. Complete mitochondrial genome of Ophichthus brevicaudatus reveals novel gene order and phylogenetic relationships of Anguilliformes. International Journal of Biological Macromolecules (2019): 609-618.
29. Kehua Zhu; Zhenming Lü; Liqin Liu; Li Gong; Bingjian Liu*. The complete mitochondrial genome of Trachidermus fasciatus (Scorpaeniformes: Cottidae) and phylogenetic studies of Cottidae, Mitochondrial DNA Part B. 2017
30. Kehua Zhu, Zhenming Lv, Liqin Liu, Li Gong, Lihua Jiang, Bingjian Liu*. The complete mitochondrial genome of Hyporhamphus dussumieri (Beloniformes; hemiramphidae) and phylogenetic studies of Beloniformes. Mitochondrial DNA Part B. 2018
31. Yi Zhou, Xujia Liu, Bingjian Liu, Peng Liu, Feng Wang,Xiaomei Zhang,Hongsheng Yang. Unusual pattern in characteristics of the eelgrass Zostera marina L. in a shallow lagoon (Swan Lake), north China: implications on the importance of seagrass conservation. Aquatic Botany, (2015)120, 178-184.
32. Juan Wang, Dongxiu Xue, Baidong Zhang, Yulong Li, Bingjian Liu, Jinxian Liu. Genome-wide SNP discovery, genotyping and their preliminary applications for population genetic inference in spotted sea bass (Lateolabrax maculatus) PloS one, 2016, 11(6): e0157809
33. Baidong Zhang, Dongxiu Xue, Juan Wang, Yulong Li, Bingjian Liu, Jinxian Liu. Development and preliminary evaluation of a genomewide single nucleotide polymorphisms resource generated by RAD-seq for the small yellow croaker (Larimichthys polyactis). Molecular Ecology Resources. 2016, 16(3)
34. Xiaomei Zhang, Yi Zhou, Peng Liu, Feng Wang, Bingjian Liu, Xujia Liu, Hongsheng Yang. Temporal pattern in biometrics and nutrient stoichiometry of the intertidal seagrass Zostera japonica and its adaptation to air exposure in a temperate marine lagoon (China): Implications for restoration and management. Marine Pollution Bulletin. 2015,94(1-2): 103-113
35. Xiaomei Zhang, Yi Zhou, Peng Liu, Feng Wang, Bingjian Liu, Xujia Liu, Hongsheng Yang. Temporal pattern in the bloom-forming macroalgae Chaetomorpha linum and Ulva pertusa in seagrass beds, Swan Lake lagoon, North China. Marine Pollution Bulletin, ISSN: 0025-326X, 2014, 89(1-2): 229-238.
36. 刘炳舰,周毅,杨红生,刘旭佳,刘鹏,张晓梅。桑沟湾楮岛沿岸大叶藻生态学特征的基础研究。海洋科学, 2013, 37(1):42-48.
37. 于磊,刘炳舰,刘进贤。日本鳗鲡离散SNP标记筛选及群体遗传多样性分析。中国海洋大学学报, 2017, 47(12)
38. 刘鹏,周毅,刘炳舰,刘旭佳,张晓梅,杨红生。大叶藻海草床的生态恢复:根茎棉线绑石移植法及其效果。海洋科学, 2013, 37(10):1-7.
39. 刘旭佳,周毅,刘炳舰,杨红生,汝少国。山东威海天鹅湖大叶藻生物量及营养元素含量的季节变化特征。中国海洋大学学报, 增刊, 2014, 44(5):69-76
40. 张晓梅,周毅,王峰,刘鹏,刘炳舰,刘旭佳,杨红生。山东荣成天鹅湖矮大叶藻生态特征。应用生态学报. 2013, 24(7):2033-2039.
41. 刘鹏,周毅,王峰,张晓梅,刘炳舰,杨红生。浅水区 (潮间带) 滤食性贝类生物沉积的现场测定. 海洋与湖沼, 2014, 45(2), 253-258.
专利
1. 刘炳舰。文蛤的SNP标记及其应用,发明专利
2. 刘炳舰。虎斑乌贼的育苗方法,发明专利:ZL201910801165.1
3. 刘炳舰。华贵栉孔扇贝与海湾扇贝的杂交制种方法,发明专利:ZL201910875073.8
4. 刘立芹,张瑶,刘炳舰,龚理,吕振明。一种提高乌贼养成率的单性养殖方法,发明专利:ZL201711337533.9
5. 吕振明,朱科桦,龚理,刘炳舰,刘立芹。一种适于曼氏无针乌贼的原位受精卵增殖放流方法,发明专利:ZL201711434988.2
6. 柳意樊,黄友坤,范鹏程,景斐,刘炳舰。一种跑道式养殖池,发明专利:ZL201910620576.0
7. 吕振明,朱科桦,刘立芹,龚理,刘炳舰。一种乌贼胚胎细胞的原代培养方法及专有试剂,发明专利:ZL201711339117.2